Degenerate diffusions arising from gene duplication models
Durrett, Rick ; Popovic, Lea
Ann. Appl. Probab., Tome 19 (2009) no. 1, p. 15-48 / Harvested from Project Euclid
We consider two processes that have been used to study gene duplication, Watterson’s [Genetics 105 (1983) 745–766] double recessive null model and Lynch and Force’s [Genetics 154 (2000) 459–473] subfunctionalization model. Though the state spaces of these diffusions are two and six-dimensional, respectively, we show in each case that the diffusion stays close to a curve. Using ideas of Katzenberger [Ann. Probab. 19 (1991) 1587–1628] we show that one-dimensional projections converge to diffusion processes, and we obtain asymptotics for the time to loss of one gene copy. As a corollary we find that the probability of subfunctionalization decreases exponentially fast as the population size increases. This rigorously confirms a result Ward and Durrett [Theor. Pop. Biol. 66 (2004) 93–100] found by simulation that the likelihood of subfunctionalization for gene duplicates decays exponentially fast as the population size increases.
Publié le : 2009-02-15
Classification:  Gene duplication,  subfunctionalization,  one-dimensional diffusions,  Lyapunov function,  60J60,  60J70,  92D15,  92D20
@article{1235140331,
     author = {Durrett, Rick and Popovic, Lea},
     title = {Degenerate diffusions arising from gene duplication models},
     journal = {Ann. Appl. Probab.},
     volume = {19},
     number = {1},
     year = {2009},
     pages = { 15-48},
     language = {en},
     url = {http://dml.mathdoc.fr/item/1235140331}
}
Durrett, Rick; Popovic, Lea. Degenerate diffusions arising from gene duplication models. Ann. Appl. Probab., Tome 19 (2009) no. 1, pp.  15-48. http://gdmltest.u-ga.fr/item/1235140331/